PUBLICATIONS

*denotes equal contributions

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2024

“Massively parallel single-cell sequencing in diverse microbial populations.”

Lan, F., Saba, J., Ross, T.D., Zhou, Z., Krauska, K., Anantharaman, K., Landick, R., Venturelli, O., Nature Methods. Link

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2023

“Single-cell analysis of multiple invertible promoters reveals differential inversion rates as a strong determinant of bacterial population heterogeneity”
F Lan*, J Saba*, Y Qian, T Ross, R Landick, OS Venturelli
Science Advances 9 (31), eadg5476

 

2022

“Polysaccharide utilization loci in Bacteroides determine population fitness and community-level interactions”
J Feng, Y Qian, Z Zhou, S Ertmer, EI Vivas, F Lan, JJ Hamilton, FE Rey, ...
Cell host & microbe 30 (2), 200-215. E12

 

2021

“Towards a deeper understanding of microbial communities: integrating experimental data with dynamic models”
Y Qian, F Lan, OS Venturelli
Current opinion in microbiology 62, 84-92

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2018

“An ultrahigh-throughput microfluidic platform for single-cell genome sequencing”
B Demaree, D Weisgerber, F Lan, AR Abate
JoVE (Journal of Visualized Experiments), e57598

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2017

“Nanoparticle delivery of Cas9 ribonucleoprotein and donor DNA in vivo induces homology-directed DNA repair”
K Lee, M Conboy, HM Park, F Jiang, HJ Kim, MA Dewitt, VA Mackley, ...
Nature biomedical engineering 1 (11), 889-901

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“Single-cell genome sequencing at ultra-high-throughput with microfluidic droplet barcoding
F Lan, B Demaree, N Ahmed, AR Abate”
Nature biotechnology 35 (7), 640-646

 

2016

“Droplet barcoding for massively parallel single-molecule deep sequencing”
F Lan, JR Haliburton, A Yuan, AR Abate
Nature communications 7 (1), 11784

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“Enhanced sequencing coverage with digital droplet multiple displacement amplification”
AM Sidore, F Lan, SW Lim, AR Abate
Nucleic acids research 44 (7), e66-e66

 

2013

“From tubes to drops: droplet-based microfluidics for ultrahigh-throughput biology”
TM Tran*, F Lan*, CS Thompson*, AR Abate
Journal of Physics D: Applied Physics 46 (11), 114004